modelarrayio.cli.utils

Shared CLI helpers for logging, outputs, and result metadata.

Functions

configure_logging(log_level)	Configure package logging once for CLI entry points.
prefixed_output_path(output_path, prefix)	Return output path with a sanitized prefix added to its filename.
prepare_output_directory(output_dir, logger)	Create an output directory and warn when reusing an existing path.
prepare_output_parent(output_file)	Ensure the parent directory for an output file exists.
read_result_names(h5_file, analysis_name, ...)	Read result names from HDF5 metadata, with compatibility fallbacks.
sanitize_result_name(result_name)	Normalize an analysis result name for use in filenames.
write_hdf5_parcel_arrays(h5_file, parcel_arrays)	Write parcellated CIFTI parcel name arrays as HDF5 string datasets.
write_hdf5_scalar_matrices(h5_file, scalars, ...)	Write per-scalar matrices into an open HDF5 file.
write_table_dataset(h5_file, dataset_name, ...)	Write a dataframe as a transposed HDF5 dataset with column metadata.
write_tiledb_parcel_arrays(base_uri, ...)	Write parcellated CIFTI parcel name arrays as TileDB string arrays.
write_tiledb_scalar_matrices(output_dir, ...)	Write per-scalar matrices into a TileDB directory.